COVID-19 Case Surveillance Public Use Data

data.cdc.gov | Last Updated 5 Apr 2024

<b>Note:</b> Authorizations to collect certain public health data expired at the end of the U.S. public health emergency declaration on May 11, 2023. The following jurisdictions discontinued COVID-19 case notifications to CDC: Iowa (11/8/21), Kansas (5/12/23), Kentucky (1/1/24), Louisiana (10/31/23), New Hampshire (5/23/23), and Oklahoma (5/2/23). Please note that these jurisdictions will not routinely send new case data after the dates indicated. As of 7/13/23, case notifications from Oregon will only include pediatric cases resulting in death. This case surveillance public use dataset has 12 elements for all COVID-19 cases shared with CDC and includes demographics, any exposure history, disease severity indicators and outcomes, presence of any underlying medical conditions and risk behaviors, and no geographic data. <h4><b>CDC has three COVID-19 case surveillance datasets:</b></h4><ul><li><a href="https://data.cdc.gov/Case-Surveillance/COVID-19-Case-Surveillance-Public-Use-Data-with-Ge/n8mc-b4w4">COVID-19 Case Surveillance Public Use Data with Geography</a>: Public use, patient-level dataset with clinical data (including symptoms), demographics, and county and state of residence. (19 data elements)</li><li><a href="https://data.cdc.gov/Case-Surveillance/COVID-19-Case-Surveillance-Public-Use-Data/vbim-akqf">COVID-19 Case Surveillance Public Use Data</a>: Public use, patient-level dataset with clinical and symptom data and demographics, with no geographic data. (12 data elements)</li><li><a href="https://data.cdc.gov/Case-Surveillance/COVID-19-Case-Surveillance-Restricted-Access-Detai/mbd7-r32t">COVID-19 Case Surveillance Restricted Access Detailed Data</a>: Restricted access, patient-level dataset with clinical and symptom data, demographics, and state and county of residence. Access requires a registration process and a data use agreement. (33 data elements)</li></ul> The following apply to all three datasets: <ul><li>Data elements can be found on the COVID-19 case report form located at <a href="https://www.cdc.gov/coronavirus/2019-ncov/downloads/pui-form.pdf">www.cdc.gov/coronavirus/2019-ncov/downloads/pui-form.pdf</a>.</li><li>Data are considered provisional by CDC and are subject to change until the data are reconciled and verified with the state and territorial data providers.</li><li>Some data cells are suppressed to protect individual privacy.</li><li>The datasets will include all cases with the earliest date available in each record (date received by CDC or date related to illness/specimen collection) at least 14 days prior to the creation of the current datasets. This 14-day lag allows case reporting to be stabilized and ensures that time-dependent outcome data are accurately captured.</li><li>Datasets are updated monthly.</li><li>Datasets are created using CDC’s <a href="https://www.cdc.gov/grants/additional-requirements/ar-25.html">Policy on Public Health Research and Nonresearch Data Management and Access</a> and include protections designed to protect individual privacy.</li><li>For more information about data collection and reporting, please see <a href="https://www.cdc.gov/coronavirus/2019-ncov/covid-data/about-us-cases-deaths.html">https://www.cdc.gov/coronavirus/2019-ncov/covid-data/about-us-cases-deaths.html.</a></li><li>For more information about the COVID-19 case surveillance data, please see <a href="https://www.cdc.gov/coronavirus/2019-ncov/covid-data/faq-surveillance.html"> https://www.cdc.gov/coronavirus/2019-ncov/covid-data/faq-surveillance.html</a><br></li></ul> <h4><b>Overview</b></h4> The COVID-19 case surveillance database includes individual-level data reported to U.S. states and autonomous reporting entities, including New York City and the District of Columbia (D.C.), as well as U.S. territories and affiliates. On April 5, 2020, COVID-19 was added to the <a href="https://ndc.services.cdc.gov/search-results-year/">Nationally Notifiable Condition List</a> and classified as “immediately notifiable, urgent (within 24 hours)” by a Council of State and Territorial Epidemiologists (CSTE) Interim Position Statement (<a href="https://cdn.ymaws.com/www.cste.org/resource/resmgr/ps/positionstatement2020/Interim-20-ID-01_COVID-19_NO.pdf">Interim-20-ID-01</a>). CSTE updated the position statement on August 5, 2020, to clarify the interpretation of antigen detection tests and serologic test results within the case classification (<a href="https://cdn.ymaws.com/www.cste.org/resource/resmgr/ps/positionstatement2020/Interim-20-ID-02_COVID-19.pdf">Interim-20-ID-02</a>). The statement also recommended that all states and territories enact laws to make COVID-19 reportable in their jurisdiction, and that jurisdictions conducting surveillance should submit case notifications to CDC. COVID-19 case surveillance data are collected by jurisdictions and reported voluntarily to CDC. For more information: <a href="https://www.cdc.gov/nndss/action/stories/covid-19-response.html">NNDSS Supports the COVID-19 Response | CDC</a>.<br> The deidentified data in the “COVID-19 Case Surveillance Public Use Data” include demographic characteristics, any exposure history, disease severity indicators and outcomes, clinical data, laboratory diagnostic test results, and presence of any underlying medical conditions and risk behaviors. All data elements can be found on the COVID-19 case report form located at www.cdc.gov/coronavirus/2019-ncov/downloads/pui-form.pdf. <h4><b>COVID-19 Case Reports</b></h4> COVID-19 case reports have been routinely submitted using nationally standardized case reporting forms. On April 5, 2020, CSTE released an Interim Position Statement with national surveillance case definitions for COVID-19 included. Current versions of these case definitions are available here: https://ndc.services.cdc.gov/case-definitions/coronavirus-disease-2019-2021/. All cases reported on or after were requested to be shared by public health departments to CDC using the standardized case definitions for laboratory-confirmed or probable cases. On May 5, 2020, the standardized case reporting form was revised. Case reporting using this new form is ongoing among U.S. states and territories. <h4><b>Data are Considered Provisional</b></h4> <ul><li>The COVID-19 case surveillance data are dynamic; case reports can be modified at any time by the jurisdictions sharing COVID-19 data with CDC. CDC may update prior cases shared with CDC based on any updated information from jurisdictions. For instance, as new information is gathered about previously reported cases, health departments provide updated data to CDC. As more information and data become available, analyses might find changes in surveillance data and trends during a previously reported time window. Data may also be shared late with CDC due to the volume of COVID-19 cases.</li><li>Annual finalized data: To create the final NNDSS data used in the annual tables, CDC works carefully with the reporting jurisdictions to reconcile the data received during the year until each state or territorial epidemiologist confirms that the data from their area are correct.</li><li>Access <a href="https://preparedness.cste.org/wp-content/uploads/2022/04/RaceEthnicityData_FINAL.pdf">Addressing Gaps in Public Health Reporting of Race and Ethnicity for COVID-19</a>, a report from the Council of State and Territorial Epidemiologists, to better understand the challenges in completing race and ethnicity data for COVID-19 and recommendations for improvement.</li></ul> <h3><b>Data Limitations</b></h3> To learn more about the limitations in using case surveillance data, visit <a href="https://www.cdc.gov/coronavirus/2019-ncov/covid-data/faq-surveillance.html">FAQ: COVID-19 Data and Surveillance</a>. <h4><b>Data Quality Assurance Procedures</b></h4> CDC’s Case Surveillance Section routinely performs data quality assurance procedures (i.e., ongoing corrections and logic checks to address data errors). To date, the following data cleaning steps have been implemented: <ul><li>Questions that have been left unanswered (blank) on the case report form are reclassified to a Missing value, if applicable to the question. For example, in the question “Was the individual hospitalized?” where the possible answer choices include “Yes,” “No,” or “Unknown,” the blank value is recoded to Missing because the case report form did not include a response to the question.</li><li>Logic checks are performed for date data. If an illogical date has been provided, CDC reviews the data with the reporting jurisdiction. For example, if a symptom onset date in the future is reported to CDC, this value is set to null until the reporting jurisdiction updates the date appropriately.</li><li>Additional data quality processing to recode free text data is ongoing. Data on symptoms, race and ethnicity, and healthcare worker status have been prioritized.</li></ul> <h4><b>Data Suppression</b></h4> To prevent release of data that could be used to identify people, data cells are suppressed for low frequency (<5) records and indirect identifiers (e.g., date of first positive specimen). Suppression includes rare combinations of demographic characteristics (sex, age group, race/ethnicity). Suppressed values are re-coded to the NA answer option; records with data suppression are never removed. <b>For questions, please contact Ask SRRG (<a href="mailto:eocevent394@cdc.gov">eocevent394@cdc.gov</a>).</b> <h4><b>Additional COVID-19 Data</b></h4> COVID-19 data are available to the public as summary or aggregate count files, including total counts of cases and deaths by state and by county. These and other COVID-19 data are available from multiple public locations: <a href="https://www.cdc.gov/covid-data-tracker/">COVID Data Tracker</a>; <a href="https://data.cdc.gov/Case-Surveillance/Weekly-United-States-COVID-19-Cases-and-Deaths-by-/pwn4-m3yp">United States COVID-19 Cases and Deaths by State</a>; <a href="https://www.cdc.gov/vaccines/covid-19/reporting/index.html">COVID-19 Vaccination Reporting Data Systems</a>; and <a href="https://www.cdc.gov/nchs/nvss/covid-19.htm">COVID-19 Death Data and Resources</a>. <b>Notes:</b> <b>March 1, 2022:</b> The "COVID-19 Case Surveillance Public Use Data" will be updated on a monthly basis. <b>April 7, 2022:</b> An adjustment was made to CDC’s cleaning algorithm for COVID-19 line level case notification data. An assumption in CDC's algorithm led to misclassifying deaths that were not COVID-19 related. The algorithm has since been revised, and this dataset update reflects corrected individual level information about death status for all cases collected to date.

Tags: covid-19, cases, surveillance, covid, covid19, coronavirus

This dataset has the following 12 columns:

Column NameAPI Column NameData TypeDescriptionSample Values
cdc_case_earliest_dtcdc_case_earliest_dtcalendar_dateThe earlier of the Clinical Date (date related to the illness or specimen collection) or the Date Received by CDC. Calculated date-- Cdc_case_earliest_dt uses the best available date from the set of dates related to illness/specimen collection and the set of dates related to when a case is reported. It is an option to end-users who need a date variable with optimized completeness. The logic of cdc_case_earliest_dt is to use the non-null date of one variable when the other is null and to use the earliest valid date when both dates are available. If no date available, then left blank.
cdc_report_dtcdc_report_dtcalendar_dateDate case was first reported to the CDC. Calculated date-- Depreciated; CDC recommends researchers use cdc_case_earliest_dt in time series and other analyses. This date was populated using the date at which a case record was first submitted to the database. If missing, then the report date entered on the case report form was used. If missing, then the date at which the case first appeared in the database was used. If none available, then left blank.
pos_spec_dtpos_spec_dtcalendar_dateDate of first positive specimen collection (Case Report Form)
onset_dtonset_dtcalendar_dateSymptom onset date, if symptomatic (Case Report Form)
current_statuscurrent_statustextCase Status (Case Report Form: What is the current status of this person?) -- Values: Laboratory-confirmed case; Probable case; Please see latest CSTE case definition for more information.
sexsextextSex (Case Report Form): Male; Female; Unknown; Other; Missing; NA
age_groupage_grouptextAge Group: 0 - 9 Years; 10 - 19 Years; 20 - 39 Years; 40 - 49 Years; 50 - 59 Years; 60 - 69 Years; 70 - 79 Years; 80 + Years; Missing; NA; The age group categorizations were populated using the age value that was reported on the case report form. Date of birth was used to fill in missing/unknown age values using the difference in time between date of birth and onset date.
race_ethnicity_combinedrace_ethnicity_combinedtextRace and ethnicity (combined): American Indian/Alaska Native, Non-Hispanic; Asian, Non-Hispanic; Black, Non-Hispanic; Multiple/Other, Non-Hispanic; Native Hawaiian/Other Pacific Islander, Non-Hispanic; White, Non-Hispanic; Hispanic/Latino; Unknown; Missing; NA. If more than race was reported, race was categorized into multiple/other races.
hosp_ynhosp_yntextHospitalization status (Case Report Form: Was the patient hospitalized?) -- Values: Yes; No; Unknown; Missing;
icu_ynicu_yntextICU admission status (Case Report Form: Was the patient admitted to an intensive care unit (ICU)?) -- Values: Yes; No; Unknown; Missing;
death_yndeath_yntextDeath status (Case Report Form: Did the patient die as a result of this illness?) -- Values: Yes; No; Unknown; Missing;
medcond_ynmedcond_yntextPresence of underlying comorbidity or disease (Case Report Form: Pre-existing medical conditions?) -- Values: Yes; No; Unknown; Missing;